Cheap flights from Santorini to Naxos

View AU$139 flight on Wed, 1 Oct. 2025Opens in a new window

Featured airlines

Qantas Airways
Virgin Australia
Air New Zealand
Jetstar
Fiji Airways
Singapore Airlines
Philippine Airlines
Qatar Airways
Scoot

  • Plan, book, fly with confidence

  • trending down icon
    Be in the know
    Get alerts if flight prices drop or rise*
  • bex rewards loyalty icon
    Book smarter
    Save up to 35% on select hotels after you book a flight*
  • payments icon
    Earn twice
    Earn your airline miles on top of our rewards
    Sign in

Cheap Flights from Santorini (JTR) to Naxos (JMK)

Prices were available within the past 7 days for one-way flights and round trip tickets for the period specified. Prices and availability are subject to change. Additional terms apply.

SKY express
Fri., 6 Jun. - Thu., 12 Jun.
JTR
Santorini
JMK
Mykonos
AU$299 Return, found 1 day ago
AU$299
Return
found 1 day ago
Select SKY express flight, departing Fri., 6 Jun. from Santorini to Mykonos, returning Thu., 12 Jun., priced at AU$299 found 1 day ago
SKY express
Tue., 2 Sep. - Tue., 9 Sep.
JTR
Santorini
JMK
Mykonos
AU$327 Return, found 3 days ago
AU$327
Return
found 3 days ago
Select SKY express flight, departing Tue., 2 Sep. from Santorini to Mykonos, returning Tue., 9 Sep., priced at AU$327 found 3 days ago
SKY express
Thu., 12 Jun. - Sun., 15 Jun.
JTR
Santorini
JMK
Mykonos
AU$327 Return, found 2 days ago
AU$327
Return
found 2 days ago
Select SKY express flight, departing Thu., 12 Jun. from Santorini to Mykonos, returning Sun., 15 Jun., priced at AU$327 found 2 days ago
SKY express
Tue., 2 Sep. - Tue., 9 Sep.
JTR
Santorini
JMK
Mykonos
AU$348 Return, found 3 days ago
AU$348
Return
found 3 days ago
Select SKY express flight, departing Tue., 2 Sep. from Santorini to Mykonos, returning Tue., 9 Sep., priced at AU$348 found 3 days ago
Aegean
Fri., 6 Jun. - Thu., 12 Jun.
JTR
Santorini
JMK
Mykonos
AU$352 Return, found 1 day ago
AU$352
Return
found 1 day ago
Select Aegean flight, departing Fri., 6 Jun. from Santorini to Mykonos, returning Thu., 12 Jun., priced at AU$352 found 1 day ago
Aegean
Tue., 2 Sep. - Tue., 9 Sep.
JTR
Santorini
JMK
Mykonos
AU$355 Return, found 3 days ago
AU$355
Return
found 3 days ago
Select Aegean flight, departing Tue., 2 Sep. from Santorini to Mykonos, returning Tue., 9 Sep., priced at AU$355 found 3 days ago
*Available to Expedia members.